Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892236.1_cds_XP_016447108.1_41901
CDS Infomation

[gene=LOC107772136] [db_xref=GeneID:107772136] [protein=testis-expressed sequence 2 protein-like isoform X2] [protein_id=XP_016447108.1] [location=join(99497..99661,103353..103588,105855..106545,106965..107310,107490..107584,108400..108594,110892..111644)] [gbkey=CDS]
Sequence

ATGTTGCTGCTCTTTATAGTGTTTGTTCTGGGAGCTGTAACGGTCCTTGCAGTGGAAGCT
GTGGGAGTGGTGCTTTTGATTCGCTGGTTGAACCGTAGAGTGGCTCGTGAAGTGGATAAA
GCAAAACCGGACGGGGACTTCGATTTCTCTTTGCACCAAAAGCAGGGGATAGTCTGGGTT
CTAGAATCTGAAAGATTACCAAAGGCTTTTCCTGTGGATAAAGCCTTGAAGCAGCAAAAG
GTCAAGAAAGAGATCTTAGAGGTTACACCTACTCAGAAATTTGCCCAAATCAAGGACCAT
TATCTCGTCCTAACAGAGTCAGATGGTTCCCATGTAGAAATTTTACTCAAAGGTTGCATG
ATAGCAGCTGTTTCTGCTTCAAGCTTATCCTCTAGAAAATGGGCAAAAAGATATCCTATT
AAAATAGAGAGCAGAGCATCAACTTTATATGAAGGAAGTAGAATACTTTACTTTTATCTT
GAGACATGCTGGGAGAAGGAAGCATGGTGCAAATCCCTTCGTCTTGCATCCTGTGAGGAC
AAAGAAAAACTAAAGTGGTTTGCCAAGTTGAACATAGAGTTTCAAAATTACCTGATGTCA
TTAAATGCAGGATATCCTTCATTTATGAAACCACATTCAAGCATTGGTGTTGATTTAGGT
GATAAATCAAGTAAGTTTGATGGTTCCTCATCAAAAGTTCGGCAATTTTTGAAAAAGCTA
GGCAAGAAAGCTTCTAAGAATGCTCCGGAAAATAAGGGAACCTTCATTTCAACGTCAGAC
CATGAAGAAAGGAAGATAAGTGAGAGAGTTCATTCCTTCCAAGACCTTGCTTTTGCTGGT
GTTGGTGTTAAATCGGCTCCAACACGCAAACCTCTTGATTTTTCTACTAAGGATGTTGTA
GTGCCTTCATCTATATCGGCATCTACTGGATCAGGAAGCCGGAGTCAAATGTCTGTTAGT
TCTGATGCAGATTCTGATGACAGGGTTTTCGGTGATGAAGGAACCCTTTGTTGGAATTTG
TTAATATCCCGTTTGTTTTTTGATGCCAAAAGAAATGACCAGATGAGAACCTCTTTGCAA
GCCAGGATTCAGAGAACGCTGTCCAATATACGAATTCCCAGTTACATAGGTGAAGTGACC
TGTACTGCCGTTAATATTGGTAACCTTCCTCCCTACATACGTGCAATGAGGGTTCTTCCC
TCAGACATGAATGAGTTTTGGGCCTTCGAAATTGATCTTCAGTATTCTGGTGGTGCAATC
TTGGATGTCGAGACAAGGGTTGCAGTTCAGGACCTTGATTTTCCTGAAGGGGACGAACCA
GAAGAAGATTCCGCTGCCAGTCATGATGTCAAATCAGATTTACTAGAAGGATTTGAGCAG
TTTGGAAAAGGAAAACAGTCTGAAGAGAATGTTGAGAAGATTGACCAAACCAACGAAGAT
GGGATGAGAAGCTCGAATATCATGCCAAGTGAGTCACCTCAAGTGTCTAGGTGGAAGTCC
ATCTTTAATTCTGTTGCCAAACAGGTTTCACAGGTTTCACTCTCACTGGGGATTAGGATT
GCATCCATTCAAGGAACTATGAGGCTATACATAAAGCCACCACCTTCAGATCAAATATGG
TTCGGATTCACGTCGATGCCCGATATAGATTTCCATTTGGACTCTTTTGTTGGGGAGCAT
AAGATCTCAAGCGGGCATCTTTCTTCGTTCCTAATCAATCGATTTAAGGTTGCTATTCGT
GAAACACTGGTACTTCCAAACTGTGAAAGTGTATGCATCCCATGCATGTTGGCGGAAAAG
GATGACTGGGTCCCCCGACAAGTTGCTCCATTTATATGGATTAATCGAGAAACTGCAGGT
AATAATGCCAACAGACAAGAAGCACCCAGCTCCCAACCTGGGGATGCAACACGATTCACT
GAAGTTGATAGGGGAGGCACCAGTGGTAATGCTGAAAGCAAAAGTGAAAATCCAGGAAGA
ACAGGATGGGCTAATCAACAAAGCAAGTCATTGGATCCACAGGCATTATTATCAGTTCCT
ACGCATAGTCCAGATACAGGAAGTACCACTAGCAATGCCGAAGGCAAACAAGAAAAGCCA
AGAAAAGTTGGATGGTCTGCACTGCAAAGCAAGTCATTGGATCCACATGCATCCTTATCA
GTTCCTATAGCGCAGCCTAACACAAGTAACCAGGCTTCAGAAGAACTGAAAGCCCCGTTA
TTGAAGCATGAGGAACAGCAAGTGGGTCACCTCAGGAGCACAGAGGAGAACATAGAATGC
AAGTCACCTTCTCGACAACTGGTACTGCTTGCAGAAAAATATCAAATTACTGGAGAAGAT
GATACAAAGTCTACAAGAATAGGGAGAAGGGCTAGGATGCTTGGTTTGGGAAAAAAAATG
GGGGAGAAACTTGAAGAGAGGGCACGTCACATAGAAGAGAAGGGGAGAAATTTAGTTGAA
AGAATGAGGGGACAACAGTGA

Peptide Sequence

PEP ID

XP_016447108.1
PEP Infomation

PREDICTED: testis-expressed sequence 2 protein-like isoform X2 [Nicotiana tabacum]
Sequence

MLLLFIVFVLGAVTVLAVEAVGVVLLIRWLNRRVAREVDKAKPDGDFDFSLHQKQGIVWV
LESERLPKAFPVDKALKQQKVKKEILEVTPTQKFAQIKDHYLVLTESDGSHVEILLKGCM
IAAVSASSLSSRKWAKRYPIKIESRASTLYEGSRILYFYLETCWEKEAWCKSLRLASCED
KEKLKWFAKLNIEFQNYLMSLNAGYPSFMKPHSSIGVDLGDKSSKFDGSSSKVRQFLKKL
GKKASKNAPENKGTFISTSDHEERKISERVHSFQDLAFAGVGVKSAPTRKPLDFSTKDVV
VPSSISASTGSGSRSQMSVSSDADSDDRVFGDEGTLCWNLLISRLFFDAKRNDQMRTSLQ
ARIQRTLSNIRIPSYIGEVTCTAVNIGNLPPYIRAMRVLPSDMNEFWAFEIDLQYSGGAI
LDVETRVAVQDLDFPEGDEPEEDSAASHDVKSDLLEGFEQFGKGKQSEENVEKIDQTNED
GMRSSNIMPSESPQVSRWKSIFNSVAKQVSQVSLSLGIRIASIQGTMRLYIKPPPSDQIW
FGFTSMPDIDFHLDSFVGEHKISSGHLSSFLINRFKVAIRETLVLPNCESVCIPCMLAEK
DDWVPRQVAPFIWINRETAGNNANRQEAPSSQPGDATRFTEVDRGGTSGNAESKSENPGR
TGWANQQSKSLDPQALLSVPTHSPDTGSTTSNAEGKQEKPRKVGWSALQSKSLDPHASLS
VPIAQPNTSNQASEELKAPLLKHEEQQVGHLRSTEENIECKSPSRQLVLLAEKYQITGED
DTKSTRIGRRARMLGLGKKMGEKLEERARHIEEKGRNLVERMRGQQ

Transcript Sequence

Gene sequence data has not been registered.